Scientific program

General Conference Schedule

 

  July, 21 July, 22 July, 23 July, 24 July, 25
Morning   Genomics of eukaryotes Metagenomics

NGS and data analysis

Poster Session

Medical genomics

Closing ceremony
Afternoon

Opening ceremony

 Genomics of bacteria and viruses  
Cultural events Welcome party ZOO Ballet

Geological Museum

Banquet

  

Preliminary list of lectures:

Genomics of eukaryotes

  • Igor Grigoryev (DOE Joint Genome Institute, USA)
    Fungal genomics for Energy and Environment
  • Konstantin Krutovsky (Georg-August-University of Göttingen, Germany)
    Targeted and complete genome de novo sequencing in conifer trees with giant and complex genomes
  • Matthias Meyer (Max Planck Institute for Evolutionary Anthropology, Germany)
    Archaic Genomes
  • Ancha Baranova (George Mason University, USA)
    We know it all: what is next? Protein-centric analysis of publicly available PPI data for functionally diverse KCTD family as an example
  • Alexandr Graphodatsky (Institute for Molecular and Cellular Bbiology SB RAS, Novosibirsk)
    Chromosomal organization of mammalian genomes
  • Anna Druzhkova (Institute for Molecular and Cellular Biology SB RAS, Novosibirsk)
    Analysis of equid fossil DNA from the Denisova cave using throughput sequencing platforms
  • Alexey Moskalev (Institute of Biology of the Komi Science Centre of the Ural, Syktyvkar)
    Transcriptome сhange of adult Drosophila melanogaster after exposure to gamma-radiation, 2,3,7,8-tetrachlorodibenzo-p-dioxin, toluene and formaldehyde
  • Fatima Smagulova (European University of Brittany, France)
    Genome wide mapping of meiotic recombination hotspots in mice
  • Ekaterina Loseva (Institute of Сhemical Biology and Fundamental  Medicine of SB RAS, Novosibirsk)
    Characterization of genomic DNA fragments generated during apoptosis
  • Vladimir Trifonov (Institute for Molecular and Cellular Biology SB RAS, Novosibirsk)
    The study of reptile sex chromosome evolution by high-throughput sequencing of chromosome specific libraries
  • Victoria Mironova (Institute of Cytology and Genetics, Novosibirsk)
    Ауксин-зависимые изменения транскриптома корней  Arabidopsis thaliana L.

Metagenomics

  • Ludmila Chistoserdova (University of Washington, USA)
    Using Metagenomics for understanding functionality of complex microbial communities
  • Evgeny Andronov (All-Russia Research Institute for Agricultural Microbiology, St.Petersburg)
    New approaches for analyses of soil microbiome
  • AnnaPopenko (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    Special traits of russian gut microbiome: functional analysis and cross-national comparative study
  • Alexandr Zelenin (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    Структура бактериального сообщества пищеварительного тракта криптобиотической хирономиды Polypedilum vanderplanki с позиции метагеномного анализа.
  • Vitaly Kadnikov (Center "Bioengineering" RAS, Moscow)
    Метагеномный анализ микробного сообщества глубинного подземного термального местообитания в Западной Сибири.

Genomics of bacteria and viruses

  • Nikolay Ravin (Center "Bioengineering" RAS, Moscow)
    Sequencing of genomes of extremophilic microorganisms representing new phylogenetic lineages
  • Konstantin Miroshnikov  (Institute of bioorganic chemistry RAS, Moscow)
    Bacteriophage genomics: Prospects of the NexGen sequencing approach
  • Olga Averina  (Vavilov Institute of General Genetics RAS, Moscow)
    Complete genome sequence of Bifidobacterium longum GT15: comparative genomic analysis, global regulatory genes, unique genes
  • Alexandr Manolov (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    De Novo assembly and comparative analysis of the genome of the bacteria P. stutzeri KOS6 isolated from hydrocarbon sludge
  • Ivan Bodoev (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    Секвенирование и de-novo сборка геномной ДНК штамма Neisseria gonorrhoeae k51.05
  • Vladislav Babenko (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    A combination of different approaches for improve sequencing assembly bacterial genome,for example Spiroplasma melliferum

NGS and data analysis

  • Alla Lapidus (Dobzhansky Center for Genome Bioinformatics, SPbU , Russia)
    Genome assembly and finishing - why hight quality references are needed
  • Marta Matvienko (CLC Bio, USA)
    Sequencing sample prep and data assembly methods: 15 years of accelerated evolution
  • Marie-Theres Gansauge (Max Planck Institute for Evolutionary Anthropology, Germany)
    Methods for ancient DNA sequencing
  • Andrey Przhibelskiy (St Petersburg Academic University, St.Petersburg)
    Genome draft assembly algorithms: from the very beginning till present-day problems
  • Elena Kostryukova (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    Effects of sample-preparation stage on results of metagenomic analysis after shotgun sequencing
  • Igor Morozov (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
    The importance of library fragments size for the quality of emulsion PCR dependent MPSS data
  • Dmitry Shtokalo (A.P.Ershov Institute of Informatics Systems SB RAS, Novosibirsk)
    Very long intergenic non-coding RNA (vlincRNA) discovery in NGS data
  • Olga Golosova  (NCIT "UNIPRO", Novosibirsk)
    Analysis of Next-Generation Sequencing Data with UGENE
  • Fedor Kolpakov (Design Technological Institute of Digital Techniques of SB RAS, Novosibirsk)
    BioUML – software platform for analysis of next generation sequencing data using collaborative and reproducible research

Medical genomics

  • Vadim Stepanov (Research Institute of Medical Genetics SB RAMS, Tomsk)
    High-throughput SNP genotyping: decanalization of immune response during human dispersal
  • Alexandr Tyacht (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
    Temporal evolution of gut microbiota composition during cancer treatment in pediatric patients as identitified by metagenomic analysis
  • Dmitry Baryakin (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
    Small non-coding RNAs of human blood plasma
  • Anna Savelyeva (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
    Ribonucleic acid composition of extracellular vesicles from healthy donor's blood
  • Ekaterina Trifonova (Research Institute of Medical Genetics SB RAMS, Tomsk)
    Identification of the pathophysiological mechanisms of preeclampsia by genome-wide expression analysis
  • Maria Nazarenko (Research Institute of Medical Genetics SB RAMS, Tomsk)
    Microarray analysis of the DNA methylation profile of vascular tissues and whole blood from patients with atherosclerosis
  • Olga Saik  (Institute of Cytology and Genetics of SB RAS, Novosibirsk)
    Analysis of RNASeq digital gene expression for expanding disease “associome” reconstructed based on information stored in databases